diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
deleted file mode 100644
index d27c286..0000000
--- a/.gitlab-ci.yml
+++ /dev/null
@@ -1,11 +0,0 @@
-before_script:
- - python --version
- - pip install -r requirements.txt
-
-stages:
- - Static Analysis
-
-flake8:
- stage: Static Analysis
- script:
- - flake8 --max-line-length=120 --ignore=E402,E266, src/*.py
\ No newline at end of file
diff --git a/LICENSE b/LICENSE
deleted file mode 100644
index 15c6e41..0000000
--- a/LICENSE
+++ /dev/null
@@ -1,661 +0,0 @@
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-PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS),
-EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF
-SUCH DAMAGES.
-
- 17. Interpretation of Sections 15 and 16.
-
- If the disclaimer of warranty and limitation of liability provided
-above cannot be given local legal effect according to their terms,
-reviewing courts shall apply local law that most closely approximates
-an absolute waiver of all civil liability in connection with the
-Program, unless a warranty or assumption of liability accompanies a
-copy of the Program in return for a fee.
-
- END OF TERMS AND CONDITIONS
-
- How to Apply These Terms to Your New Programs
-
- If you develop a new program, and you want it to be of the greatest
-possible use to the public, the best way to achieve this is to make it
-free software which everyone can redistribute and change under these terms.
-
- To do so, attach the following notices to the program. It is safest
-to attach them to the start of each source file to most effectively
-state the exclusion of warranty; and each file should have at least
-the "copyright" line and a pointer to where the full notice is found.
-
-
- Copyright (C) 2021 Adrien Bourmault
-
- This program is free software: you can redistribute it and/or modify
- it under the terms of the GNU Affero General Public License as published
- by the Free Software Foundation, either version 3 of the License, or
- (at your option) any later version.
-
- This program is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- GNU Affero General Public License for more details.
-
- You should have received a copy of the GNU Affero General Public License
- along with this program. If not, see .
-
-Also add information on how to contact you by electronic and paper mail.
-
- If your software can interact with users remotely through a computer
-network, you should also make sure that it provides a way for users to
-get its source. For example, if your program is a web application, its
-interface could display a "Source" link that leads users to an archive
-of the code. There are many ways you could offer source, and different
-solutions will be better for different programs; see section 13 for the
-specific requirements.
-
- You should also get your employer (if you work as a programmer) or school,
-if any, to sign a "copyright disclaimer" for the program, if necessary.
-For more information on this, and how to apply and follow the GNU AGPL, see
-.
diff --git a/contributing.md b/contributing.md
deleted file mode 100644
index 9eb3ab9..0000000
--- a/contributing.md
+++ /dev/null
@@ -1,194 +0,0 @@
-# Gem-graph Client
-
-## Procédure de développement (Bonnes pratiques)
-
-### Une seule branche par fonctionnalité : dev/
-
- git fetch origin // récupère les branches sur le remote (git.a-lec.org)
- git switch devel // car on part toujours de la branche devel
- git branch dev/
- git switch dev/
- git push --set-upstream origin dev/ // dit au serveur que la branche existe
-
- [...]
-
-Une fois fonctionnalité terminée et push accompli, ouvrir une merge request à
-l'aide du lien fourni par git push
-
-
-### Lors du travail sur une branche (les [...] du premier point)
-
-Pour chaque session de travail :
-
- git pull
- [...]
- git commit -am "WIP: "
- git push
-
-Une fois terminée la fonctionnalité et s'il y a un objectif de version :
-
- git tag -a vM.m.p -m "Fonctionnalité terminée"
- git commit -am "Fonctionnalité terminée"
- git push
-
-## Objectifs de développement
-
-A gem-graph client can be used to:
-
-- create or edit a gem-graph model
-- control a run of a gem-graph model by a gem-graph server
-- get and study the results of such a run
-
----
-
-In order to execute these functions, it must be able to manage:
-
-inputs / outputs
-
- - load and save models
- - use xml schemas to check the validity of models
- - connect to an instance of gem-graph server
- - dialog with this instance
-
-a GUI able to:
-
- - render and edit the model
- - states
- - objects types
- - tags and references
- - transitions (edition 'de novo' or starting from a state copy)
- - transitions trees
- - users trees
-
- - control a run using commands:
- - run / stop
- - speed up / slow down
- - do / undo / redo
- - predefine run duration, sampling frequency and nature
- - predefine interruption parameters
- (according to server performances and/or model results)
- - preselect the search algorithm in the conditions tree
-
- - monitor performances of the server
-
- - view and analyse the results of a run
- - history
- - phase diagrams (structures / fluxes)
- - statistics
- - errors
-
- - facilitate usage of the software
- - preferences
- - context info
- - help
-
----
-
-Definitions (see also: gem graph README and gem graph server README)
-
-1) XML Schema
-
-- According to the model xml schema,
- a gem-graph model must include at least the following data groups:
-
- + identity (name, owner, creation date, version, references,...)
- + parameters (about simulation and space: dimension, size x y z,...)
- + objects: each object is a connex graph drawn as a set of arrows
- + savestates: each state (objects, situations, tags) is drawn as a set of arrows
- + transitions: each transition is defined as two sets of arrows
- + conditions: that are specified as nodes in a tree (see below)
-
-
-2) Automaton rewriting a geometric graph
-
-- A gem-graph is a geometric graph = a graph whose nodes have coordinates in a space.
-- A gem-graph model describes an automaton that can rewrite a gem-graph.
-- An automaton that can rewrite a gem-graph has to define states and transitions.
-
-- States belong to a unique global space in which all the transitions occur.
-- Each transition rewrites a part of the global space. This part is called the local space.
-
-- States are drawn in spaces (global or local) using arrows.
-- States can be combinations of objects, situations and/or tags.
-- Objects and tags are connex graphs (i.e. graphs whose nodes are all connected).
-- A situation describes the relative positions of several objects in the global space.
-- A tag is a part of an object or situation which encodes a human readable text (annotation, ref, value,...).
-
-- Several connex graphs can be used to describe the same object.
-- An instance of the class object groups all these graphs plus some comments or values.
-
-- Transitions are defined by an initial and a final local states.
-- The initial state of a transition can be evaluated by a set of conditions.
-- Each condition is defined as the association of:
-
- + a location (space unit (x, y, z) and site number)
- + an arrow number (or weight) as several arrows can be stacked at the same location
-
-
-- All the conditions can be ordered in a single tree: the 'tree of conditions' (see below).
-- In the XML model file, in order to write and read this tree,
- each condition has a node identifier (node_id) and a parent.
-
-
-3) Data structures
-
-- Arrows are represented (encoded) by numbers in sites.
-- In each space units is a finite number of sites.
-- The site 0 always points towards its own space unit.
-- Each other site points towards a neighbouring (not necessarily adjacent) state unit.
-- Each site of each space unit can 'contain' 0 or n arrows.
-- The set of states of all the sites of all the space units defines a space state.
-
-- A condition is satisfied if both following quantities are equal:
- + the number of arrows (or weights) specified by the condition
- + the number of arrows present in the space at the same location specified by the condition.
-
-
-- When conditions are evaluated by the automaton, these two values are compared.
-- These evaluations are done by threads (workers) managed by the scheduler of the server.
-
-- A transition rule associates several conditions to several assignments.
-- An assignment instruction assigns a number (n) of arrows to a site of a space unit of the global space.
-
-- The conditions of a transition rule must all be satisfied for this rule to be applied.
-
-- Several transition rules can have conditions that read the same site.
-- As all the transition rules share at least one common conditions on the local space origin,
- all the conditions of all the transition rules can be ordered as a single conditions tree.
-- In this conditions tree, each condition is a node and each set of assignments is a leave.
-- The root of this tree is the condition on the local space origin.
-- The other conditions are met by following a predefined path through all the locations of the local space.
-- This path is determined by the user according to the design and performances of the model.
-- In the XML model file, in order to write and read the conditions tree, each condition has a node identifier and a parent.
-
-
-4) Algorithms
-
-- The search of a transition rule in the conditions tree is done by the threads of the scheduler (see gem-graph-server README)
-- The result of these searches can be:
- + success (the founded rule is applied)
- + failure (there is no rule for this situation; the local situation is returned to the client)
- + error
-
-- The rules and the conditions tree are designed by the client and executed by the server scheduler threads.
- It is the responsability of the user to manage:
- + conditions deficit, conflicts and redundancy
- + rules deficit, conflicts and redundancy
- + optimisation of the conditions tree by design of an adequate path through all the locations of the local space
- + approximations of objects, situations and phenomena
-
-
-5) Meta-edition (future)
-
-- As mentionned above, several connex graphs can be used to describe the same object.
-- An instance of the class object, called a meta-object, then groups all these graphs plus some comments or values.
-
-- In future versions, the client should provide tools in order to help model designers to edit
- + objects from meta-objects. (vectorisation)
- + transitions from meta-transitions. (AI ?)
-
-
-NB Adequate data structures should describe these meta-transitions and meta-objets.
-
-
----
diff --git a/models/dimers random walk.xml b/models/dimers random walk.xml
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-
-
-
- Modèle de test
-
- Léontine Patinette
-
- 2
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diff --git a/models/testing.xml b/models/testing.xml
deleted file mode 100644
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+++ /dev/null
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-
-
-
- Modèle de test
- Gaston Lagaffe
- 2
- 1629830000
- 1.0
- Ref
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diff --git a/requirements.txt b/requirements.txt
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diff --git a/schemas/models_0.2.1.xmls b/schemas/models_0.2.1.xmls
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diff --git a/src/main.py b/src/main.py
deleted file mode 100644
index 342e2b6..0000000
--- a/src/main.py
+++ /dev/null
@@ -1,53 +0,0 @@
-#!/usr/bin/python3
-# ------------------------------------------------------------------------- #
-# Client main file #
-# #
-# Copyright © 2021 The Gem-graph Project #
-# #
-# This file is part of gem-graph. #
-# #
-# This program is free software: you can redistribute it and/or modify #
-# it under the terms of the GNU Affero General Public License as #
-# published by the Free Software Foundation, either version 3 of the #
-# License, or (at your option) any later version. #
-# #
-# This program is distributed in the hope that it will be useful, #
-# but WITHOUT ANY WARRANTY; without even the implied warranty of #
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the #
-# GNU Affero General Public License for more details. #
-# #
-# You should have received a copy of the GNU Affero General Public License #
-# along with this program. If not, see . #
-# ------------------------------------------------------------------------- #
-
-import gi
-gi.require_version("Gtk", "3.0")
-from gi.repository import Gtk
-from lxml import etree
-
-
-modelPath = "../models/dimers random walk.xml"
-schemPath = "../schemas/models_0.2.xmls"
-
-tree = etree.parse(modelPath)
-
-## Main window
-
-
-class MyWindow(Gtk.Window):
-
- def __init__(self):
- super().__init__(title="Hello World")
-
- self.button = Gtk.Button(label="Click Here")
- self.button.connect("clicked", self.on_button_clicked)
- self.add(self.button)
-
- def on_button_clicked(self, widget):
- print("Hello World")
-
-
-win = MyWindow()
-win.connect("destroy", Gtk.main_quit)
-win.show_all()
-Gtk.main()