WIP: Adding Transitions to the Conditions Tree: first approach.
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@ -109,17 +109,17 @@
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<arrow site="1" weight="1" x="1"/>
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<arrow site="2" weight="1" x="2"/>
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</transition>
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</transition>
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<transition id="move_a_dimer_to_west" date="1630000000" author="Ni moi !"
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parent="4" probability="1">
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<transition id="move_a_dimer_to_west" date="1630000000" author="Ni moi !"
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parent="4" probability="1">
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<arrow site="1" weight="0" x="0"/>
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<arrow site="2" weight="0" x="1"/>
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<arrow site="2" weight="1" x="0"/>
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<arrow site="1" weight="1" x="1"/>
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</transition>
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</transition>
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</transitions>
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17
src/model.py
17
src/model.py
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@ -369,6 +369,21 @@ class Transition:
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if(child.tag == "arrow"):
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self.__arrows.append(Arrow(child))
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def get_id(self):
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return self.node.attrib["id"]
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def get_date(self):
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return self.node.attrib["date"]
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def get_author(self):
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return self.node.attrib["author"]
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def get_parent(self):
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return self.node.attrib["parent"]
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def get_probability(self):
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return self.node.attrib["probability"]
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def get_arrow(self, i):
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return self.__arrows[i]
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@ -385,7 +400,7 @@ class Transitions:
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def get_transition(self, i):
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return self.__transitions[i]
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def get_transitiosn_array(self):
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def get_transitions_array(self):
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return self.__transitions
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## Model
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@ -1,5 +1,5 @@
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# https://anytree.readthedocs.io/en/latest/_modules/anytree/node/nodemixin.html
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from anytree import NodeMixin, RenderTree
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from anytree import NodeMixin, RenderTree, LevelOrderIter
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import model
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# TODO Contrôles de cohérence des données
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@ -8,6 +8,7 @@ import model
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conditions_set = set()
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conditions_list = []
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transitions_set = set()
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for i in range(0, len(model.testmodel.get_conditions().get_conditions_array())):
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condition = model.testmodel.get_conditions().get_condition(i)
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@ -18,6 +19,12 @@ for i in range(0, len(model.testmodel.get_conditions().get_conditions_array())):
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condition.get_weight()))
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for i in range(0,
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len(model.testmodel.get_transitions().get_transitions_array())):
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transition = model.testmodel.get_transitions().get_transition(i)
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transitions_set.add((transition.get_id(), transition.get_parent()))
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class CondTreeNode(NodeMixin):
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def __init__(self, id, x, site, weight, parent_node_id):
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super(CondTreeNode, self).__init__()
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@ -30,20 +37,48 @@ class CondTreeNode(NodeMixin):
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def add_parent_node(self, parent_node):
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self.parent = parent_node
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print('orphan node ', self.id, ' is adopted by node ', parent_node.id)
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# print('orphan node ', self.id, ' is adopted by node ', parent_node.id)
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class TransTreeNode(NodeMixin):
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def __init__(self, parent_node_id):
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super(TransTreeNode, self).__init__()
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self.parent_node_id = parent_node_id
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self.parent = None
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def add_parent_leaf_node(self, parent_node, transition_node_id):
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print('orphan transition node', transition_node_id,
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'is to be adopted by leaf node', parent_node.id,
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type(self),
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type(parent_node))
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# self.parent = parent_node
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for i in conditions_set: # sorted(conditions_set, key=i.id):
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condition = CondTreeNode(i[0], i[2], i[3], i[4], i[1]) # TODO y,z,...
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conditions_list.append(condition)
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root = 0
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for i in conditions_list:
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if (i.parent is None):
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for j in conditions_list:
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if (i.parent_node_id == j.id):
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i.add_parent_node(j)
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else:
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root = j
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for pre, fill, node in RenderTree(conditions_list[3]):
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for i in transitions_set:
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transition_node = TransTreeNode(i[1])
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for condition_node in LevelOrderIter(root):
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if condition_node.is_leaf:
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if (str(condition_node.id) == transition_node.parent_node_id):
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transition_node.add_parent_leaf_node(condition_node, i[1])
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for pre, fill, node in RenderTree(root):
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treestr = u"%s%s" % (pre, node.id)
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print(treestr.ljust(16), ' n =', node.weight,
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' at (site', node.site, 'in cell', node.x, ')')
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print(treestr.ljust(16), node.weight, ' arrow(s) at [site', node.site,
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'in cell', node.x, end=']\n')
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# print([node.id for node in LevelOrderIter(root) if node.is_leaf])
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